Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866108:139866135:[+] chr13:21721760:21721783:[+] nonBSJ supported 3UTR

circRNA 5':AAAAUCCACAUCUUCCAAUGGCCUCCAG 3'


            |||:|| |:||| ||||||||


target  3':AUUUGGGACA--AGGGU--CCGGAGGUA 5'

 -25.30 23 RIC-seq
chrX:139866437:139866452:[+] chr13:21722298:21722315:[+] nonBSJ supported 3UTR

circRNA 5':GGUAC-GUCUUCCA-ACA 3'


            |:|| |||||| ||


target  3':ACGUGACAGAAGUAGUGA 5'

 -13.10 5 RIC-seq
chrX:139866455:139866470:[+] chr13:21722298:21722315:[+] nonBSJ supported 3UTR

circRNA 5':GGUAC-GUCUUCCA-ACA 3'


            |:|| |||||| ||


target  3':ACGUGACAGAAGUAGUGA 5'

 -13.10 6 RIC-seq