Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866283:139866355:[+]	chr13:21563305:21563362:[-]	nonBSJ supported	CDS	circRNA 5':UUCCAGAAAAUCCUUGUCUUCCCUCAAAUCCAUAGCUUCCGAAAAAUCCAGGUCUUCC-AGGAAAU-CCGUGUCU 3' \|\|\|\|\| \|\| \|\| \|\| \|\|\| \|\| \|\|\|\|\| \|\|:\|:\|\| \|\|\| \|\|\|: \|\| target 3': AGGUCGC---GGCACCCC-GGCAGUCGCGGCUUCGAAC-----------CCGGGAGCAUCCCCCAUGGCG-AGU 5'	-32.60	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr13:21563305:21563362:[-]	target	-	chr13:21563330-21563331	C>T	PACA-CA	ICGC
chrX:139866283:139866355:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC