Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866274:139866286:[+] chr10:56106193:56106206:[-] nonBSJ supported CDS

circRNA 5':AUCCA-UGUCUUCC 3'


            |||| |||||:|


target  3':GAGGUAACAGAGGA 5'

 -13.90 1 RIC-seq
chrX:139866274:139866297:[+] chr10:56106193:56106215:[-] nonBSJ supported CDS

circRNA 5':AUCCA-UGUCUUCCAGAAAAUCCUU 3'


            |||| |||| ||| |||||||||


target  3':GAGGUAACAG-AGGACUUUUAGGA 5'

 -24.70 1 RIC-seq
chrX:139866274:139866300:[+] chr10:56106193:56106218:[-] nonBSJ supported CDS

circRNA 5':AUCCA-UGUCUUCCAGAAAAUCCUUGUC 3'


            |||| |||| ||| |||||||| |||


target  3':GAGGUAACAG-AGGACUUUUAGG-ACAC 5'

 -25.70 34 RIC-seq