5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865819:139865879:[+] | chr20:61834235:61834312:[-] | nonBSJ supported | CDS |
circRNA 5':AUCCAGGU------------CUUCCAGUCAGUCAGUGUCU-UCCAGAAAAAUCUACGUCUUCCACCA--------AAUCCAG 3' |||||| || ||||:| || |: ||| :|||:| |: ||| ||| ||:|||| target 3':AAGGUCCUCUCAACGAUAGCGACGGUCGGGGAGGCG-AGACGGGUUUGC---GGCGCA-AAGACAACGCACCCCGUUGGGUCG 5' |
-35.10 | 1 | RIC-seq |
| chrX:139865819:139865886:[+] | chr20:61834235:61834292:[-] | nonBSJ supported | CDS |
circRNA 5':AUCCAGGUCUUCCA--GUCA--GUCAGUGUCUUCCAGAAAAAUCUACGUCUUCCACCAAAU-CCAGGUCUUCC 3' |||||| :|| |:|||: :||: || ||: |||||: || || ||| target 3':AAGGUCCUCUCAACGAUAGCGACGGUCGGGGAG-------------GC-GAGACGGGUUUGCGGCGCA-AAGA 5' |
-34.00 | 1 | RIC-seq |