5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866405:139866432:[+] | chr11:113078557:113078586:[+] | nonBSJ supported | CDS |
circRNA 5':UGUCUUCCA---GC-CUACUUGUGUCUUCCAA 3' ||||||| || ||| :||| || :||| target 3':GCAGAAGGAGAACGAGAUAGACA-AG-GGGUA 5' |
-21.20 | 1 | RIC-seq |
| chrX:139866490:139866540:[+] | chr11:113078587:113078628:[+] | nonBSJ supported | CDS |
circRNA 5':AGGUACGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGU-CUUC-CAG 3' ||| |: || ||| |||| ||| |||| |||| || target 3':ACCA-GUCGACC--CUUGAUA--GCAGCGAC----UUC--UACAUGAAGAGUA 5' |
-11.80 | 2 | RIC-seq |
| chrX:139865451:139865477:[+] | chr11:113092377:113092398:[+] | nonBSJ supported | Exon |
circRNA 5':UCCACAUCUUCCAGACAAUCCAUGUCU 3' ||||||| ||| ||| target 3':CGGUGUAGUUGGUACACU-----CAGU 5' |
-16.40 | 2 | RIC-seq |
| chrX:139866419:139866465:[+] | chr11:113146422:113146455:[+] | nonBSJ supported | Exon |
circRNA 5':CUUGUGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUACGUCUUC 3' ||| | ||||| ||:| |||| || |||:| target 3':AGACUC-GAAGGA----UCUA---AGAAUUAAA---CCC--CAGGAA 5' |
-11.80 | 2 | RIC-seq |