Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865598:139865626:[+] chr9:139402474:139402494:[-] nonBSJ supported CDS

circRNA 5':ACGUCUUCCAGGAAAUCCAUGUCUUC-CAA 3'


            ||||: ||||| ||:|| ||


target  3':AGCAGGUGGUCC---------AGGAGUGUC 5'

 -20.50 11 RIC-seq
chrX:139866128:139866145:[+] chr9:139402475:139402494:[-] nonBSJ supported CDS

circRNA 5': G-CCUCCAGGUCUUC-CAGA 3'


            | || |||||||:|| |||


target  3':GCAGGUGGUCCAGGAGUGUC 5'

 -25.90 9 RIC-seq