Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866567:139866610:[+]	chr9:131802827:131802868:[+]	nonBSJ supported	5UTR	circRNA 5':UGUCUUCCAACUAAGCUACGUCUUCCAACAAAUCCAUGU-CUUCC 3' \|:\| \|:\| \|\| \|\|\|:\|\| \|\|\| \| \|\|\|\|\| target 3':CCGGUUACGGGGUCCGUUUCAGGAGUCCC----GGUUCUCGAAGGU 5'	-19.90	1	RIC-seq
chrX:139866567:139866611:[+]	chr9:131802827:131802868:[+]	nonBSJ supported	5UTR	circRNA 5':UGUCUUCCAACUAAGCUACGUCUUCCAACAAAUCCAUGU-CUUCCU 3' \|:\| \|:\| \|\| \|\|\|:\|\| \|\|\| \| \|\|\|\|\| target 3':CCGGUUACGGGGUCCGUUUCAGGAGUCCC----GGUUCUCGAAGGU 5'	-21.10	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866567:139866610:[+]	circRNA	-	chrX:139866592-139866593	C>A	LICA-CN	ICGC
chrX:139866567:139866611:[+]	circRNA	-	chrX:139866592-139866593	C>A	LICA-CN	ICGC