Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865851:139865864:[+] chr9:19089463:19089479:[-] nonBSJ supported CDS

circRNA 5':GAAAAAUCU---ACGUC 3'


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target  3':AUUUUUAGACGAUGCAC 5'

 -8.40 1 RIC-seq
chrX:139865851:139865882:[+] chr9:19089463:19089496:[-] nonBSJ supported CDS

circRNA 5':GAAAAAUCU---ACGUCUUCCACCAAAUCCAGGUC 3'


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target  3':AUUUUUAGACGAUGCACGCUUUACCGUAGA-CCGU 5'

 -11.60 26 RIC-seq