Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865801:139865826:[+] chr8:98699751:98699775:[+] nonBSJ supported CDS

circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGU 3'


            ||| :|||||


target  3':ACACUACCAUAAAAGAUA-GGGUCCC 5'

 -10.60 10 RIC-seq
chrX:139866767:139866786:[+] chr8:98703335:98703354:[+] nonBSJ supported CDS

circRNA 5':ACGUCUCCAGUGUGCUGAUC 3'


            |:|||||||||| |||:


target  3':CGUAGAGGUCACAGAACUGA 5'

 -25.70 23 RIC-seq
chrX:139866767:139866786:[+] chr8:98703336:98703354:[+] nonBSJ supported CDS

circRNA 5':ACGUCUCCAGUGUGCUGAUC 3'


            |:|||||||||| |||:


target  3':CGUAGAGGUCACAGAACUG 5'

 -25.10 1 RIC-seq
chrX:139866771:139866786:[+] chr8:98703335:98703349:[+] nonBSJ supported CDS

circRNA 5':CUCCAGUGUGCUGAUC 3'


            |||||||| |||:


target  3': AGGUCACAGAACUGA 5'

 -16.90 1 RIC-seq