Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866566:139866586:[+] chr8:110587064:110587084:[-] nonBSJ supported 3UTR

circRNA 5':AUGUCUUCCAACUAAGCUACG 3'


            || ||||| ||||


target  3':AACUGAAGGACAAAGAGAUGG 5'

 -12.70 1 RIC-seq
chrX:139866602:139866634:[+] chr8:110587064:110587099:[-] nonBSJ supported 3UTR

circRNA 5':AUGUCUUCCUAUA--UCU-CCAGGU-CUUCCAGCAUC 3'


            || |||||| ||| || ||: | || :|||


target  3':AACUGAAGGACAAAGAGAUGGACCGUGUUGGGUGUA 5'

 -22.80 1 RIC-seq
chrX:139866602:139866634:[+] chr8:110587064:110587100:[-] nonBSJ supported 3UTR

circRNA 5':AUGUCUUCCUAUA--UCU-CCAGGU-CUUCCAGCAUC 3'


            || |||||| ||| || ||: | || :|||


target  3':AACUGAAGGACAAAGAGAUGGACCGUGUUGGGUGUAC 5'

 -23.30 28 RIC-seq