Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866690:139866713:[+] chr8:41367808:41367835:[+] nonBSJ supported 3UTR

circRNA 5':CUGUGUCUUC----CAGCAUCU-UCAUGU 3'


            |||| |||||: ||||:


target  3':AACACUACUUGUUCGUCGUGCAUAGUAU 5'

 -12.20 1 RIC-seq
chrX:139866690:139866714:[+] chr8:41367807:41367835:[+] nonBSJ supported 3UTR

circRNA 5':CUGUGUCUUC----CAGCAUCU-UCAUGUC 3'


            |||| |||||: ||||:|


target  3':AACACUACUUGUUCGUCGUGCAUAGUAUA 5'

 -13.10 19 RIC-seq