Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865965:139865981:[+] chrX:153627850:153627878:[+] nonBSJ supported 5UTR

circRNA 5':AAUCCA----UGUCU--------UCCAGA 3'


            ||||| ||:|| :||||


target  3':GUAGGUGAAAACGGAAAAAGGCGGGGUCC 5'

 -13.80 1 RIC-seq
chrX:139865965:139865991:[+] chrX:153627848:153627878:[+] nonBSJ supported 5UTR

circRNA 5':AAUCCA----UGUCU---UCCAGAAAAUCCAUGU 3'


            ||||| ||:|| ||| :||| ||


target  3':GUAGGUGAAAACGGAAAAAGGCG----GGGUCCAG 5'

 -13.90 4 RIC-seq
chrX:139866148:139866163:[+] chrX:153627850:153627878:[+] nonBSJ supported 5UTR

circRNA 5': AUCCA----UGUCU--------UCCAGA 3'


            ||||| ||:|| :||||


target  3':GUAGGUGAAAACGGAAAAAGGCGGGGUCC 5'

 -13.40 15 RIC-seq
chrX:139866274:139866289:[+] chrX:153627850:153627878:[+] nonBSJ supported 5UTR

circRNA 5': AUCCA----UGUCU--------UCCAGA 3'


            ||||| ||:|| :||||


target  3':GUAGGUGAAAACGGAAAAAGGCGGGGUCC 5'

 -13.40 21 RIC-seq
chrX:139866277:139866296:[+] chrX:153627873:153627900:[+] nonBSJ supported 5UTR

circRNA 5':CAUGUCUUCCAGAAA----------AUCCU 3'


            |||| ||| ||| ||||


target  3': UACACC-GGUGUUUCGCCUUUGAGUAGGU 5'

 -7.80 1 RIC-seq