Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866478:139866503:[+] chrX:135956315:135956343:[-] nonBSJ supported CDS

circRNA 5': GUCUUCCAACAA---AGGUACGUCUUCCA 3'


            |:||:|| ||:| || |||||


target  3':ACGGAGGGGGAGAUAGUCUA-GCCGAAGGA 5'

 -22.00 20 RIC-seq
chrX:139866479:139866503:[+] chrX:135956318:135956343:[-] nonBSJ supported CDS

circRNA 5': UCUUCCAACAA-AGGUACGUCUUCCA 3'


            ||::|| ||:| || |||||


target  3':GAGGGGGAGAUAGUCUA-GCCGAAGGA 5'

 -18.80 1 RIC-seq