Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866135:139866174:[+] chrX:70601649:70601682:[+] nonBSJ supported CDS

circRNA 5':GGUCUU-CCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUC 3'


            |||:| |||| |||||:| ||||| ||||::|


target  3':ACAGGAGGGUCGC--AGGUAUAU--GGUCU---AGGAGUAA 5'

 -32.00 1 RIC-seq
chrX:139866135:139866175:[+] chrX:70601645:70601682:[+] nonBSJ supported CDS

circRNA 5':GGUCUU-CCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUCU 3'


            |||:| |||| |||||:| ||||| || |||||


target  3':ACAGGAGGGUCGC--AGGUAUAU--GGUCUAGGAGUAACAGU 5'

 -33.40 48 RIC-seq