Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866550:139866587:[+] chr5:70806413:70806454:[+] nonBSJ supported 5UTR

circRNA 5':GUCUUCCAGAAAAUAUAU-GUCU---UCCAACUAAGCUACGU 3'


            |||||||| |||| |||| ||||:


target  3':GAGAAGGUCAACAAAAGUUCAGACAGAGGUAAAGUAGAUGUC 5'

 -23.30 1 RIC-seq
chrX:139866604:139866639:[+] chr5:70806424:70806454:[+] nonBSJ supported 5UTR

circRNA 5':GUCUUCCUAUAUCUC-CAGGUCUUCCAGCAUCUCCAG 3'


            |||||| ||:|||| ||||||


target  3':GAGAAGGUCAACAAAAGUUCAGAC------AGAGGUA 5'

 -21.60 1 RIC-seq