Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866741:139866793:[+] chr5:75766036:75766075:[+] nonBSJ supported Intron

circRNA 5':AACUGGCUCAAUAUCCAUGUCUUCCAACGUCUC-CAGUGUGCUGAUCUUCUGAC 3'


            |||:||| |||| ||||| |||| |||| |||: :|||||


target  3':CUGAUCGA-----AGGU--AGAAGA----AGAGAGUCA-ACGGAU--GAGACUA 5'

 -34.30 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866741:139866793:[+] circRNA - chrX:139866793-139866794 C>T LICA-CN ICGC
chrX:139866741:139866793:[+] circRNA - chrX:139866793-139866794 C>T LICA-CN ICGC