Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865355:139865385:[+] chr5:40826767:40826795:[-] nonBSJ supported 3UTR

circRNA 5':CUGUGUCAAGGUCUUCCAACAACUCCGGGUC 3'


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target  3':UACACUCUUACA-AAGGACUCCU-GGUCUAC 5'

 -14.40 20 RIC-seq
chrX:139865383:139865397:[+] chr5:40826776:40826791:[-] nonBSJ supported 3UTR

circRNA 5': GUCUUCC--AGCGACUU 3'


            || |||| || |||:


target  3':ACA-AAGGACUC-CUGGU 5'

 -8.50 1 RIC-seq