Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866260:139866277:[+] chr4:124240154:124240179:[+] nonBSJ supported 3UTR

circRNA 5':AUGU-CUUC-CAGACUA-----UCC 3'


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target  3':AACAUGAUAAGUUUGAUUUUAGAGGA 5'

 -8.70 2 RIC-seq
chrX:139865761:139865784:[+] chr4:124235062:124235094:[+] nonBSJ supported CDS

circRNA 5':CAGUGUCU---UCCAGA-----AAGAAAU-CCA 3'


            |:||||| |||||| |||| | ||


target  3':CUUACAGAAGAAGGUCUCGGUCUUCUCGACGGA 5'

 -17.30 2 RIC-seq