5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865359:139865371:[+] | chr4:114257015:114257027:[+] | nonBSJ supported | CDS |
circRNA 5':GUCAAGGUCUUCC 3' || |||||||| target 3':AAGAUCCAGAAGA 5' |
-13.80 | 1 | RIC-seq |
| chrX:139865418:139865448:[+] | chr4:114277354:114277378:[+] | nonBSJ supported | CDS |
circRNA 5':AGG-UCUUCCAGAUAAUCCUGAGCU-UCCA-GAA 3' || ||||| |||||||| |||| || target 3':CCCGAGAAG--------GGACUCGAGAGGUACU 5' |
-25.10 | 1 | RIC-seq |
| chrX:139865623:139865661:[+] | chr4:114274574:114274612:[+] | nonBSJ supported | CDS |
circRNA 5':CCAAUAAUUUC--AAGGU-CUUCCAUCAAAUACAGAUCUUCC 3' || ||||| ||||| ||| ||||| target 3':AGUCACUAAAGAUUUCCACGAAAAACGGAUCGG---AGAAGA 5' |
-11.30 | 1 | RIC-seq |
| chrX:139865687:139865702:[+] | chr4:114276359:114276377:[+] | nonBSJ supported | CDS |
circRNA 5':UCUGUG-UCUUC--CACCA 3' |||: ||| |||| target 3':UGACGGUAGAUUUCGUGGC 5' |
-11.00 | 2 | RIC-seq |
| chrX:139866418:139866427:[+] | chr4:114276726:114276734:[+] | nonBSJ supported | CDS |
circRNA 5':ACUUGUGUCU 3' |||||||| target 3':CGAACACAG 5' |
-12.20 | 1 | RIC-seq |
| chrX:139866427:139866450:[+] | chr4:114284508:114284526:[+] | nonBSJ supported | CDS |
circRNA 5': UUCCAACAAAGGUACGUCUUCCAA 3' |||| :|| |||| target 3':CGAGGAG----UCACUUU--AGGUC 5' |
-5.90 | 1 | RIC-seq |
| chrX:139866436:139866474:[+] | chr4:114274334:114274371:[+] | nonBSJ supported | CDS |
circRNA 5':AGGUACGUCUU-CCAACAAAGGUACGUCUUCCAACAAAGG 3' |:|| |:| || ||::||:||| ||| target 3':AUUAUCUUGGACGGAAUAGUCUGUGUAGACACCAG-UUC 5' |
-13.20 | 2 | RIC-seq |
| chrX:139866483:139866536:[+] | chr4:114153314:114153369:[+] | nonBSJ supported | CDS |
circRNA 5':CCAACAAAGGUACG----UCUUC--CAGAAAAUCCACGUCUUCCAACC--AAGCCAUGUCUU 3' ||||| ::| |||| ||| ||| || ||||||| ||| target 3':UGUUGUAGUUACACUAAGAGAACCCGUC-----GGUACAUAUUUCCUCAUUUCGGUA-AGAC 5' |
-17.10 | 1 | RIC-seq |