5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865945:139865967:[+] | chr3:112970353:112970375:[+] | nonBSJ supported | 3UTR |
circRNA 5': AAGAUCCACGUCUUCCAGAAAAU 3' |||| |: |||||||| target 3':UUUCUUACCGUUUU-GGUCUUUUU 5' |
-10.60 | 1 | RIC-seq |
| chrX:139865969:139865982:[+] | chr3:112970424:112970435:[+] | nonBSJ supported | 3UTR |
circRNA 5':CAUGUCUUCCAGAA 3' |||||| |||| target 3': UACAGAU-GUCUG 5' |
-10.30 | 1 | RIC-seq |
| chrX:139866122:139866165:[+] | chr3:113005860:113005893:[+] | nonBSJ supported | 3UTR |
circRNA 5':CCAAUGGCCUCCAGGUCUUCCAGACUAUCCAUGUCU-UCCAGAAA 3' |||:|| ||| ||:| |||||| ||||||| target 3':AGUUGCCCA---UCCUGAGGAA--------UACAGAGAGGUCUUA 5' |
-26.90 | 1 | RIC-seq |
| chrX:139866215:139866235:[+] | chr3:113005862:113005885:[+] | nonBSJ supported | 3UTR |
circRNA 5': AGGAAAUCC--GUGUCU-UCCAGC 3' |||| ||| :||||| ||||| target 3':AUCCUG-AGGAAUACAGAGAGGUCU 5' |
-21.40 | 2 | RIC-seq |