Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866610:139866666:[+]	chr3:111719734:111719788:[+]	nonBSJ supported	CDS	circRNA 5':CUAUAUCUCCAG-GUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCUUC-CAA 3' \|\|\|\| \|\|\|\| \|\|\|\| \|\| \|\| \|\| \|\| \|\|\| :\|\|:\| \|\|\|\|:\| \|\| target 3': GUAUCUAGGUGGCAGACUUUC-UACAGCCACC-AAGACUGUGGUAUC-CAGAGGCGUC 5'	-26.60	18	RIC-seq
chrX:139866633:139866650:[+]	chr3:111719732:111719752:[+]	nonBSJ supported	CDS	circRNA 5':UCUCCA-GGG-CUUC-CAGCA 3' \| \|\|\| :\|\| \|\|:\| \|\|\|\| target 3':UGUGGUAUCCAGAGGCGUCGA 5'	-17.40	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr3:111719734:111719788:[+]	target	-	chr3:111719776-111719777	C>T	BTCA-JP	ICGC
chr3:111719734:111719788:[+]	target	-	chr3:111719782-111719783	A>T	EOPC-DE	ICGC
chr3:111719734:111719788:[+]	target	-	chr3:111719784-111719785	C>A	LICA-CN	ICGC
chr3:111719734:111719788:[+]	target	-	chr3:111719786-111719787	A>T	LICA-CN\|LAML-KR	ICGC