Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866005:139866027:[+] chr3:57154660:57154690:[-] nonBSJ supported Intron

circRNA 5':CCCAGU-------CUUCCAGAAA-AUCCACG 3'


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target  3':CGGUCGACCUCGGGAAGGUCAAUCUAGGUGA 5'

 -23.50 2 RIC-seq
chrX:139866413:139866439:[+] chr3:57185551:57185576:[-] nonBSJ supported Intron

circRNA 5': AGCCUACUUGUGUCUUCCAACAA--AGGU 3'


            ||| ||| ||| |||| |||


target  3':GUCGUC-GAAGACAAU---UUGUCUAUCCU 5'

 -9.30 1 RIC-seq
chrX:139866418:139866429:[+] chr3:57185496:57185507:[-] nonBSJ supported Intron

circRNA 5':ACUUGUGUCUUC 3'


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target  3':AGUAUACAGAAC 5'

 -8.40 1 RIC-seq