Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866292:139866316:[+] chr2:210863559:210863580:[+] nonBSJ supported 3UTR

circRNA 5':AUCCUUGUCUUCCCUCAAAUCCAUA 3'


            |||:||:| ||| ||||


target  3':GAGGGACGGUUCU--GUUCCGGUA 5'

 -16.10 2 RIC-seq
chrX:139866367:139866387:[+] chr2:210863560:210863582:[+] nonBSJ supported 3UTR

circRNA 5':CACGUCUU-CCA--ACAAAGCCAU 3'


            || :|:| ||| |||| ||||


target  3':AUGAGGGACGGUUCUGUUCCGGU 5'

 -15.90 1 RIC-seq
chrX:139866367:139866388:[+] chr2:210863559:210863582:[+] nonBSJ supported 3UTR

circRNA 5':CACGUCUU-CCA--ACAAAGCCAUG 3'


            || :|:| ||| |||| |||||


target  3':AUGAGGGACGGUUCUGUUCCGGUA 5'

 -17.10 25 RIC-seq
chrX:139865784:139865792:[+] chr2:210804254:210804262:[+] nonBSJ supported CDS

circRNA 5':AGGUCUUCC 3'


            |:|||||


target  3':CCUAGAAGA 5'

 -8.60 1 RIC-seq
chrX:139865823:139865831:[+] chr2:210804254:210804262:[+] nonBSJ supported CDS

circRNA 5':AGGUCUUCC 3'


            |:|||||


target  3':CCUAGAAGA 5'

 -8.60 1 RIC-seq