Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865772:139865838:[+] chr2:176794313:176794367:[-] nonBSJ supported 3UTR

circRNA 5':AGAAAGAAAUCCAGGUCUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGG-UCUUCCA--GUCAGU 3'


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target  3':AUUUUGUUUGUGUUAA-----UCUCUUGAAUG-AGAA---------UUGGUUUCAAGAAGGAUACAGUUU 5'

 -18.50 1 RIC-seq
chrX:139866309:139866315:[+] chr2:176794665:176794671:[-] nonBSJ supported 3UTR

circRNA 5':AAUCCAU 3'


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target  3':AUAGGUC 5'

 -5.60 2 RIC-seq