Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866169:139866198:[+] chr2:159433813:159433831:[+] nonBSJ supported CDS

circRNA 5':CUUGUCUUCCCUUAAAUCUAUAGCUUCCAA 3'


            |||:||| || :||||||


target  3':AGACGGAAAGG-----------UGAAGGUC 5'

 -16.50 1 RIC-seq
chrX:139866169:139866210:[+] chr2:159433803:159433831:[+] nonBSJ supported CDS

circRNA 5':CUUGUCUUCCCUUAAAUCUAUAGCUUCCAAAAAAUC-CGGGUC 3'


            |||:||| || :|||||| || |||||


target  3':AGACGGAAAGG-----------UGAAGGUCA---AGAGCCCAC 5'

 -23.90 17 RIC-seq
chrX:139866171:139866210:[+] chr2:159433803:159433830:[+] nonBSJ supported CDS

circRNA 5': UGUCUUCCCUUAAAUCUAUAGCUUCCAAAAAAUC-CGGGUC 3'


            ||:||| || :|||||| || |||||


target  3':GACGGAAAGG-----------UGAAGGUCA---AGAGCCCAC 5'

 -23.10 1 RIC-seq