Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866404:139866432:[+] chr2:96970488:96970513:[-] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGCCUACUUGUGUCUUCCAA 3'


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target  3':AACAGAGGGU---AUGCCCACGGGAGGUC 5'

 -30.40 2 RIC-seq
chrX:139866531:139866559:[+] chr2:96956230:96956250:[-] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGAAAAUCCACGUCUUCCAGA 3'


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target  3':CCAGAAGGCC------GUGCAG--GGUCG 5'

 -22.40 2 RIC-seq
chrX:139866594:139866612:[+] chr2:96950307:96950326:[-] nonBSJ supported CDS

circRNA 5': ACAAAUCCAUGUCUUCCUA 3'


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target  3':AUGGUCAGGUACAUAUGGAC 5'

 -13.20 1 RIC-seq