Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866701:139866740:[+]	chr1:202574766:202574804:[-]	nonBSJ supported	CDS	circRNA 5':AGCAUCUUCAUGUCUUCCAACAACUACCCAGU-CUUCCAUC 3' \|\|\| \|\|\|\|\|\|:\|\|\| \|\| \|\|\|\|\|: \|::\|\|\|: target 3':CCGUUU--GUACAGGAGGACCGAGAGGGGUCGUGGGGGUGA 5'	-38.50	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr1:202574766:202574804:[-]	target	-	chr1:202574784-202574785	G>A	LAML-KR	ICGC
chr1:202574766:202574804:[-]	target	-	chr1:202574786-202574787	T>A	RECA-EU	ICGC