5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865709:139865735:[+] | chr1:227307566:227307594:[-] | nonBSJ supported | CDS |
circRNA 5':AGUCUUCCAGUAA-AUCUAGUUCUU-CCA 3' |||| ||:| ||||||||||| || target 3':ACAGAUUUUCGUAGUAGAUCAAGAACGGA 5' |
-25.20 | 2 | RIC-seq |
| chrX:139866652:139866687:[+] | chr1:227261962:227262014:[-] | nonBSJ supported | CDS |
circRNA 5':CUGCUCGUCU-UCCAACA---------------UCUCCACGUCUUCCAG-CAU 3' ||||||| :|||| :||||| |||| ||| ||| target 3':AACGAGCACAUGGGUUCGACCUUAAAGAAUUACGGAGGUUAAGAA-GUCAGUAA 5' |
-27.10 | 1 | RIC-seq |
| chrX:139866690:139866750:[+] | chr1:227330657:227330721:[-] | nonBSJ supported | CDS |
circRNA 5':CUGUGUCUU-CCAGCAUCUUC---AUGUCUUCCAACAACUACCCAGUCUUCCAUCAACU-GGC-UCA 3' |:||| |||:|| ||| ||| |||| ||| || target 3':UAUACAUUUUGGUUGUUUACCGUCUACCACCGGUCUUUUAC--GUCAUACACAACCACCCCCGUAGC 5' |
-17.20 | 2 | RIC-seq |
| chrX:139866709:139866749:[+] | chr1:227330658:227330690:[-] | nonBSJ supported | CDS |
circRNA 5':CAUGUCUU-CCAACAACUACCCAGUCUUCCAUCAACUGGCUC 3' |||| ||||||| ||| ||||: target 3':AUACAUUUUGGUUGUUUACC-GUCUACC--------ACCGGU 5' |
-15.60 | 2 | RIC-seq |