Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866260:139866307:[+] chr1:224455773:224455833:[-] nonBSJ supported CDS

circRNA 5':AUGU-CUUCCAGACUAUCCAUGUCUU---------------CCAGAAAAUC-CUUGUCUUCCCUC 3'


            ||| |||||||||:|||||| ||| ||| | ||||: ||||


target  3':CGCACGAAGGUCUGGUAGGUAGAGACAUUCAUCGACUAAGUGGUGAGCCUGUGAACG---GGGA 5'

 -42.50 20 RIC-seq