Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865535:139865553:[+] chr1:231096948:231096967:[-] nonBSJ supported CDS

circRNA 5':AGCAAAUCCAG--UCUUC-CAG 3'


            ||| |||| ||||| ||


target  3':ACGUAU-GGUCUUAGAAGAGU 5'

 -13.80 1 RIC-seq
chrX:139865535:139865554:[+] chr1:231096948:231096969:[-] nonBSJ supported CDS

circRNA 5':AGCAAAUCCAG--UCUUC-CAGC 3'


            ||| |||| ||||| |||


target  3':ACGUAU-GGUCUUAGAAGAGUCA 5'

 -16.70 12 RIC-seq