Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865775:139865806:[+]	chr1:210911949:210911979:[-]	nonBSJ supported	Intron	circRNA 5':AAGAAAUCCAGGUCUUCCA--GU-CAAUCAGUGUC 3' \|\| \|\|\| \|\|\| \|\| \|: \|\|\|\|\|\|\| \|: target 3':AUCCG-AGG-CCAC--GGCACCGUGUUAGUCUCGA 5'	-17.80	4	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr1:210911949:210911979:[-]	target	-	chr1:210911963-210911964	G>A	PACA-CA	ICGC