Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865784:139865811:[+] chr1:168169199:168169221:[+] nonBSJ supported CDS

circRNA 5':AGGUCUUCCAGUCAAUCAGUGUCUUCCA 3'


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target  3':AUC-GAAG---AGUGUUUGAC-GAAGGA 5'

 -14.30 15 RIC-seq
chrX:139865934:139865952:[+] chr1:168148327:168148345:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUC-CU-GAAGAUCCA 3'


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target  3':CACCGACGAGACCUUC--GGC 5'

 -5.80 1 RIC-seq