Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866638:139866650:[+] chr19:8601218:8601231:[-] nonBSJ supported CDS

circRNA 5':AGGGCUUCCA-GCA 3'


            ||:| :|| ||


target  3':ACCUGCGGGACCGC 5'

 -11.10 1 RIC-seq
chrX:139866638:139866660:[+] chr19:8601213:8601232:[-] nonBSJ supported CDS

circRNA 5':AGG-GCUUCCAGCAUCUGCUCGUC 3'


            || ||| || :||| |||


target  3': CCACGACCUGCG-GGACC-GCA 5'

 -11.70 1 RIC-seq