Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865811:139865845:[+]	chr21:27253674:27253706:[-]	nonBSJ supported	3UTR	circRNA 5':AGAAAGA-AAUCCAGGUCUUCCAGUCAGUCAGUGUC 3' \|\| \|:\| \|\|\| \|\|\|\| \|:\|\| :\| :\|\|: target 3':ACUAUUUAUUA-GUCCUCUC--UUAGAUAAGUACGU 5'	-9.80	2	RIC-seq
chrX:139866255:139866278:[+]	chr21:27394315:27394332:[-]	nonBSJ supported	CDS	circRNA 5':AAGCCAUGUCUUCCAGACUAUCCA 3' \|\|\|\|\|: \|\|\|\|\|\| \|\|\| target 3':GUCGGUGAAGAAGG------AGGA 5'	-20.30	2	RIC-seq
chrX:139866257:139866278:[+]	chr21:27394316:27394332:[-]	nonBSJ supported	CDS	circRNA 5': GCCAUGUCUUCCAGACUAUCCA 3' \|\|\|\|: \|\|\|\|\|\| \|\|\| target 3':UCGGUGAAGAAGG------AGGA 5'	-18.80	2	RIC-seq
chrX:139866482:139866506:[+]	chr21:27542907:27542927:[-]	nonBSJ supported	CDS	circRNA 5':UCCAACAAAGGUACGUCUUCCAGAA 3' \|\|\| \|\| :\|:\| \|\| \|\|\|:\| target 3':CGGUCGUCCUCGU-CAC--GGUUU 5'	-10.80	2	RIC-seq