Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866153:139866175:[+] chr11:65293675:65293689:[+] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGAAAAUCCUUGUCU 3'


            | |||||| ||:|:|


target  3':UC-GAAGGU-------GAGCGGU 5'

 -12.40 1 RIC-seq
chrX:139866189:139866219:[+] chr11:65293662:65293689:[+] nonBSJ supported CDS

circRNA 5':UAGCUUCCAAAAAAUCCGGGUCU-UCCAGGAA 3'


            |||||||| ||:| || |||| ||


target  3': UCGAAGGUGAGC--GGUCGAGCCAGGUGCU 5'

 -27.80 11 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr11:65293662:65293689:[+] target 1028665 chr11:65293670-65293671 C>T Acute_infantile_liver_failure-cerebellar_ataxia-peripheral_sensory_motor_neuropathy_syndrome ClinVar