Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866795:139866819:[+] chr17:15978924:15978945:[-] nonBSJ supported CDS

circRNA 5':UUCAGGUCUUCCAGUGUCUGCAAUA 3'


            ||||| || ||||| ||||


target  3':GAGUCCUGACG---ACAGAAGUUAC 5'

 -16.70 2 RIC-seq
chrX:139866795:139866826:[+] chr17:15978924:15978949:[-] nonBSJ supported CDS

circRNA 5':UUCAGGUCUUCCAGUGUCUGCAAUAUCCAGGU 3'


            ||||| || ||||| |||| ||:


target  3':GAGUCCUGACG---ACAGAAGUUAC----CCGU 5'

 -16.80 19 RIC-seq