Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866404:139866412:[+] chr16:84512614:84512621:[-] nonBSJ supported 3UTR

circRNA 5':AUGUCUUCC 3'


            || ||||


target  3':AAC-GAAGA 5'

 -4.30 1 RIC-seq
chrX:139866419:139866440:[+] chr16:84512614:84512634:[-] nonBSJ supported 3UTR

circRNA 5':CUUGUGUCUUCCAACAAAGGUA 3'


            |||: |||: ||:|


target  3': AACGAAGAGACAUCUGUCUAG 5'

 -7.20 1 RIC-seq
chrX:139866422:139866447:[+] chr16:84512614:84512636:[-] nonBSJ supported 3UTR

circRNA 5':GUGUCUUCCAACAAAGGUACGUCUUC 3'


            || |||| ||::| :|||:


target  3':AAC-GAAGAGACA-UCUGUCUAGAG 5'

 -7.60 14 RIC-seq
chrX:139866422:139866448:[+] chr16:84512614:84512637:[-] nonBSJ supported 3UTR

circRNA 5':GUGUCUUCCAACAAAGGUACGUCUUCC 3'


            || |||| ||::| :|||:|


target  3':AAC-GAAGAGACA-UCUGUCUAGAGG 5'

 -10.30 1 RIC-seq
chrX:139866422:139866449:[+] chr16:84512614:84512638:[-] nonBSJ supported 3UTR

circRNA 5':GUGUCUUCCAACAAAGGUACGUCUUCCA 3'


            || |||| ||::| :|||:||


target  3':AAC-GAAGAGACA-UCUGUCUAGAGGG 5'

 -14.50 2 RIC-seq
chrX:139866422:139866452:[+] chr16:84512614:84512641:[-] nonBSJ supported 3UTR

circRNA 5':GUGUCUUCCAACAAAGGUACGUCUUCCAACA 3'


            || |||| ||::| :|||:|||||


target  3':AAC-GAAGAGACA-UCUGUCUAGAGGGUUG 5'

 -19.70 18 RIC-seq