Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866490:139866498:[+] chr15:89877060:89877070:[-] nonBSJ supported 5UTR

circRNA 5':AGGU--ACGUC 3'


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target  3':ACCUUCUGCAC 5'

 -4.60 1 RIC-seq
chrX:139866637:139866643:[+] chr15:89877062:89877068:[-] nonBSJ supported 5UTR

circRNA 5':CAGGGCU 3'


            |:|:|


target  3':CUUCUGC 5'

 -4.10 3 RIC-seq
chrX:139866639:139866644:[+] chr15:89877056:89877061:[-] nonBSJ supported 5UTR

circRNA 5':GGGCUU 3'


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target  3':ACCGAC 5'

 -6.20 1 RIC-seq
chrX:139866639:139866644:[+] chr15:89877057:89877061:[-] nonBSJ supported 5UTR

circRNA 5':GGGCUU 3'


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target  3': CCGAC 5'

 -4.80 3 RIC-seq