Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866183:139866220:[+] chr15:98515545:98515575:[+] nonBSJ supported 3UTR

circRNA 5':AAUCUAUAGCUUCCAAAAAAUCCGGGUCUUC---CAGGAAA 3'


            ||| ||| |:| :|||||: ||||||


target  3':GUAGUCAUC----------UGGAUCCAGAGAACUGUCCUUA 5'

 -18.80 1 RIC-seq
chrX:139866190:139866218:[+] chr15:98515548:98515581:[+] nonBSJ supported 3UTR

circRNA 5':AGCUUCCAAAAAAU--CC-GGGUCUUC---CAGGA 3'


            ||| ||| || :|||||: ||||


target  3':CUGACGGUAGUCAUCUGGAUCCAGAGAACUGUCC 5'

 -19.10 1 RIC-seq
chrX:139866190:139866219:[+] chr15:98515547:98515581:[+] nonBSJ supported 3UTR

circRNA 5':AGCUUCCAAAAAAU--CC-GGGUCUUC---CAGGAA 3'


            ||| ||| || :|||||: |||||


target  3':CUGACGGUAGUCAUCUGGAUCCAGAGAACUGUCCU 5'

 -20.70 1 RIC-seq
chrX:139866190:139866220:[+] chr15:98515545:98515580:[+] nonBSJ supported 3UTR

circRNA 5':AGCUUCCAAAAAAU--CC-GGGUCUUC---CAGGAAA 3'


            ||| ||| || :|||||: ||||||


target  3': UGACGGUAGUCAUCUGGAUCCAGAGAACUGUCCUUA 5'

 -21.20 1 RIC-seq
chrX:139866190:139866220:[+] chr15:98515545:98515581:[+] nonBSJ supported 3UTR

circRNA 5':AGCUUCCAAAAAAU--CC-GGGUCUUC---CAGGAAA 3'


            ||| ||| || :|||||: ||||||


target  3':CUGACGGUAGUCAUCUGGAUCCAGAGAACUGUCCUUA 5'

 -21.60 33 RIC-seq
chrX:139866190:139866220:[+] chr15:98515546:98515581:[+] nonBSJ supported 3UTR

circRNA 5':AGCUUCCAAAAAAU--CC-GGGUCUUC---CAGGAAA 3'


            ||| ||| || :|||||: ||||||


target  3':CUGACGGUAGUCAUCUGGAUCCAGAGAACUGUCCUU 5'

 -21.60 1 RIC-seq
chrX:139866201:139866220:[+] chr15:98515545:98515567:[+] nonBSJ supported 3UTR

circRNA 5':AAUCCGGGUCUUC---CAGGAAA 3'


            |:| :|||||: ||||||


target  3':CUGGAUCCAGAGAACUGUCCUUA 5'

 -17.80 1 RIC-seq
chrX:139866226:139866246:[+] chr15:98515557:98515582:[+] nonBSJ supported 3UTR

circRNA 5': GUCUUCCAGCA--AGUCCAC-GUC 3'


            | || ||| || || || |||


target  3':ACUGACGGUAGUCAUCUGGAUCCAGA 5'

 -9.80 23 RIC-seq
chrX:139866227:139866247:[+] chr15:98515556:98515580:[+] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGCA--AGUCCAC-GUCU 3'


            || ||| || || || ||||


target  3':UGACGGUAGUCAUCUGGAUCCAGAG 5'

 -10.00 1 RIC-seq