Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866671:139866704:[+] chr15:99501067:99501094:[+] nonBSJ supported 3UTR

circRNA 5':UCCACGUCUUCCAGCAUCUCUGUGUCUUCCAGCA 3'


            ||||: |||| || ||:|| |:|


target  3':CGGUGUCCCU-GUCGGUGA-----AGGAGUUUGA 5'

 -16.40 11 RIC-seq
chrX:139866671:139866719:[+] chr15:99501050:99501094:[+] nonBSJ supported 3UTR

circRNA 5':UCCACGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGU--CUUCCA 3'


            ||||: |||| || ||:|| |:| |||||


target  3':CGGUGUCCCU-GUCGGUGA-----AGGAGUUUGACUAUUUUUCCCGAAGGG 5'

 -20.40 13 RIC-seq
chrX:139866671:139866719:[+] chr15:99501051:99501094:[+] nonBSJ supported 3UTR

circRNA 5':UCCACGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGU--CUUCCA 3'


            ||||: |||| || ||:|| |:| |||||


target  3':CGGUGUCCCU-GUCGGUGA-----AGGAGUUUGACUAUUUUUCCCGAAGG 5'

 -20.70 1 RIC-seq