Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865481:139865522:[+]	chr14:27064675:27064717:[-]	nonBSJ supported	5UTR	circRNA 5': GGACAAUCCA-UGUCUUCCAAGAAGCUCCAAGUCU---UCCAGUAA 3' \|:\|\|\|\|\| \|\|\|\|:\|\|\| \| \|\|\|\| \|\|\|\|\|:\| target 3':ACUUGUUAACAGACAGGAGGGAA---G-GGUUAAUAUCUAGGUCGUC 5'	-31.60	2	RIC-seq
chrX:139866616:139866657:[+]	chr14:27066580:27066621:[-]	nonBSJ supported	5UTR	circRNA 5':CUCCAGGUCUUCCAGCAUCUCCAG---GGCUUCCAGCAUCUGCUC 3' \|\|\|\|\|\|\|\|\| \|:\|\|\|\| \|\| \|:\|\| \|\|\|\|\|\| target 3':CAGGUCCAGAUACCCUU-GGGGUCACACCCAGGGCA--AGACGAC 5'	-37.40	6	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr14:27064675:27064717:[-]	target	-	chr14:27064708-27064709	G>A	BTCA-JP	ICGC