Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866758:139866792:[+]	chr13:60530755:60530790:[-]	nonBSJ supported	Intron	circRNA 5':UGUCUUC---CAACGUCUCCAGU---GUGCUGAUCUUCUGA 3' \|:\|::\| \|\|\| \|\|\|:\|\|\| \| \|::\|\|\| \|\|\| target 3':UCGGGGGUGUGUUUCAGGGGUGAUCCCGUGAC-----GACC 5'	-25.00	1	RIC-seq
chrX:139866758:139866814:[+]	chr13:60530755:60530819:[-]	nonBSJ supported	Intron	circRNA 5':UGUCUUC---CAACGUCUCCAGUG------UGCUGAUCUU--CUGACAUUCAGGUCUUCCAGUGUCUG 3' \|:\|::\| \|\|\| \|\|\|:\|\|\| \|: \|\|\|\|\| \|\|\| \|\|\| \| \|\|\| \|\|\|\|: target 3':UCGGGGGUGUGUUUCAGGGGUGAUCCCGUGACGACCCACCUCGACACUCU-UCC-GUCGGUGACAGG 5'	-39.60	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866758:139866814:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC