Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865977:139866037:[+]	chr12:53874477:53874551:[-]	nonBSJ supported	3UTR	circRNA 5':CCAGAAAAUC------CA-UGUCUUCC--AGUAACCU------------CCCAGUCUUCCAGAAAAUCCACGUCUUCCCAAC 3' \|\|:\|\|\|\| \|\| \|\|:\| \|\| \|\| \|\|\|\|\| \|\|\|\|\|:\|\|\| \|\| \|\|\| \| \|\|:\|\|\|\|\|\| target 3':UGUUUUUUUACUCAAUGUAACGGU-GGACUCUUUGGAGUCUCCCCUCCUGGGUCGGAA--UCGG--AGG-G-AGGAGGGUUC 5'	-40.60	27	RIC-seq
chrX:139866000:139866037:[+]	chr12:53874507:53874551:[-]	nonBSJ supported	3UTR	circRNA 5': AACCU------------CCCAGUCUUCCAGAAAAUCCACGUCUUCCCAAC 3' \|\|\|\|\| \|\|\|\|\|:\|\|\| \|\| \|\|\| \| \|\|:\|\|\|\|\|\| target 3':UUUGGAGUCUCCCCUCCUGGGUCGGAA--UCGG--AGG-G-AGGAGGGUUC 5'	-33.20	1	RIC-seq