Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865671:139865702:[+]	chr12:126071585:126071625:[+]	nonBSJ supported	Exon	circRNA 5':AUGUCUUCCAGAAAAA------UCUGU----GUCUUCCACCA 3' \|\|\|\| \|\|\|\|\| \|\|\|\|\| \|\|\|\|\| \|\|\|\| target 3': ACAGUAGGUCGUCUUGUUCAAAGACAAGUACAGAAAGUGGA 5'	-25.80	1	RIC-seq
chrX:139866487:139866529:[+]	chr12:126070281:126070322:[+]	nonBSJ supported	Exon	circRNA 5':CAAAGGUA-CGUCUUCCAGAAAAUCCACGUCUUCCAACCA-AGCC 3' \|\|\|\|\|\|\| \|:\|\|\|\|\|\|\|:\|\| \|\|\|\|\|\| \|\|\| target 3':UUUUCCAUAGUAGAAGGUUUUGU---UGCAGAUACUCCUACUCGU 5'	-32.50	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr12:126070281:126070322:[+]	target	-	chr12:126070297-126070298	C>T	PACA-CA	ICGC