Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865734:139865756:[+] chr12:46321095:46321120:[-] nonBSJ supported CDS

circRNA 5':CAGAA--AAAUCUAGAUCUUCCAGU 3'


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target  3':CUCUUACUUUAGAUCUAGAAGCUCAU 5'

 -22.50 1 RIC-seq
chrX:139865734:139865758:[+] chr12:46321095:46321122:[-] nonBSJ supported CDS

circRNA 5':CAGAA--AAAUCUAGAUCUUCCAGU-CA 3'


            |||| |||||||||||||| ||| |


target  3':CUCUUACUUUAGAUCUAGAAGCUCAUGC 5'

 -22.90 19 RIC-seq