Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865335:139865389:[+]	chr4:76735032:76735082:[+]	nonBSJ supported	3UTR	circRNA 5': UCCAGGG----UUUCCGAUGGCACC-UGUGUCAAGGUCUUCCAACAACUCCGGG-UCUUCC 3' \|\|\| \|\|: ::\|\|\|: \|\|\| \|\|\|\|\|\|\| :\|\|:\| \|\|\| \|\|\|\|\| target 3':GAGG-CCUUACGGGAGGUGUA-GUGACACACAGUCGUAGGAA---------GCCGAAGAAGU 5'	-32.80	1	RIC-seq
chrX:139865335:139865390:[+]	chr4:76735030:76735082:[+]	nonBSJ supported	3UTR	circRNA 5': UCCAGGG----UUUCCGAUGGCACC-UGUGUCAAGGUCUUCCAACAACUCCGGG-UCUUC-CA 3' \|\|\| \|\|: ::\|\|\|: \|\|\| \|\|\|\|\|\|\| :\|\|:\| \|\|\| \|\|\|\|\| \| target 3':GAGG-CCUUACGGGAGGUGUA-GUGACACACAGUCGUAGGAA---------GCCGAAGAAGUGA 5'	-33.00	23	RIC-seq