5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866205:139866233:[+] | chr4:77957310:77957333:[+] | nonBSJ supported | 3UTR |
circRNA 5':CGGGUCUUCCAGGAAAUCCGUGUCUUCCA 3' ||| |||||| ||||: :| |||| target 3': UCC-GAAGGUACUUUGAU--UA-AAGGA 5' |
-18.50 | 1 | RIC-seq |
| chrX:139866387:139866426:[+] | chr4:77957301:77957333:[+] | nonBSJ supported | 3UTR |
circRNA 5':UGUCUUCCAUCAAAUUAAUGUCUUCCAGCCUACUUGUGUC 3' | ||||||| |||:|||| |||| ||||| ||: target 3':UCCGAAGGUACUUUGAUUA---AAGGA---AUGAA-ACGA 5' |
-20.00 | 1 | RIC-seq |
| chrX:139865668:139865708:[+] | chr4:77926917:77926950:[+] | nonBSJ supported | CDS |
circRNA 5':UCCAUGUCUUCCAGAAAAAUCUGUGUCUUCCACCAAAUCCA 3' || |||| || ||||| |||| |||||||| target 3': GG-ACAGUAGAAAUAAAUAGAC-CAGA----GGUUUAGGG 5' |
-27.50 | 2 | RIC-seq |
| chrX:139865491:139865518:[+] | chr4:77942330:77942360:[+] | nonBSJ supported | Intron |
circRNA 5':UGUCUUCCAAGAAGC-----UCCAAGUCUUCCA 3' ||| ||| |:|||| ||| ||:||| target 3':CUAG-AGGAUUUUCGAUAAGAGGAA-AGGAGGA 5' |
-21.00 | 2 | RIC-seq |
| chrX:139866270:139866306:[+] | chr4:77958054:77958099:[+] | nonBSJ supported | Intron |
circRNA 5':GACUAUCCAUGUCUUCC------------AGAAAAUCCUUGUCU-UCCCU 3' ||: ||| ||:|::|| |:|||||| |:||: |||| target 3':AUGGAAGG-ACGGGGGGAACUUUUCUUUUUUUUUUAG--AUAGGUAGGG 5' |
-29.50 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr4:77958054:77958099:[+] | target | - | chr4:77958085-77958086 | G>A | BTCA-JP | ICGC |