Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865444:139865508:[+] chr15:63600612:63600686:[+] nonBSJ supported 3UTR

circRNA 5': CAGAAAAUCCACA-UCUUC-CAGACAAUCCAUGUC--------UUCCGGACAAUCCAUGUCUUCC--AAGAAGCUCC 3'


            ||:|| ||| ||| | ||| ||:|| |||| |||||||| ||| |||| ||||


target  3':UGUUUUC--GGUAAAAGAUGCGUCAGACGUCUAUAGUAGUAAUUAAGGAAAG-UAGGUACAAAAGUAAUUCUACGAGA 5'

 -34.60 1 RIC-seq
chrX:139865476:139865508:[+] chr15:63600612:63600645:[+] nonBSJ supported 3UTR

circRNA 5':CUUCCGGACAAUCCAUGUCUUCC--AAGAAGCUCC 3'


            |||| |||||||| ||| |||| ||||


target  3':UAAGGAAAG-UAGGUACAAAAGUAAUUCUACGAGA 5'

 -26.90 1 RIC-seq