Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866524:139866529:[+] chr2:204292025:204292031:[+] nonBSJ supported CDS

circRNA 5':CAAGCC 3'


            |||||


target  3':UUUCGGG 5'

 -5.70 1 RIC-seq
chrX:139866524:139866535:[+] chr2:204292020:204292031:[+] nonBSJ supported CDS

circRNA 5':CAAGCCAUGUCU 3'


            ||||| |||


target  3':UUUCGGGUCAGU 5'

 -12.00 2 RIC-seq
chrX:139866524:139866538:[+] chr2:204292017:204292031:[+] nonBSJ supported CDS

circRNA 5':CAAGCCAUGUC-UUCC 3'


            ||||| ||| :||


target  3':UUUCGGGUCAGUGAG 5'

 -12.90 15 RIC-seq