5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865823:139865831:[+] | chr2:170489935:170489943:[+] | nonBSJ supported | 3UTR |
circRNA 5':AGGUCUUCC 3' |:| ||| target 3':CCUAAAAGA 5' |
-2.20 | 1 | RIC-seq |
| chrX:139865338:139865355:[+] | chr2:170493490:170493507:[+] | nonBSJ supported | CDS |
circRNA 5':AGGGUUUCCGAUGGCACC 3' |||||: ||| |||| target 3':ACCCAAGAACUAGCGUGA 5' |
-19.60 | 8 | RIC-seq |
| chrX:139865338:139865389:[+] | chr2:170493461:170493507:[+] | nonBSJ supported | CDS |
circRNA 5':AGGGUUUCCGAUGGCAC-CUG-UGUCAAGGUCUUCCAACAACUCCGGGUCUUCC 3' |||||: ||| |||| || ||: ||| || || || | |||| target 3':ACCCAAGAACUAGCGUGAGAAGACGAAGACAG--GGAUGA--AGA--C-GAAGC 5' |
-29.30 | 8 | RIC-seq |
| chrX:139865338:139865389:[+] | chr2:170493462:170493507:[+] | nonBSJ supported | CDS |
circRNA 5':AGGGUUUCCGAUGGCAC-CUG-UGUCAAGGUCUUCCAACAACUCCGGGUCUUCC 3' |||||: ||| |||| || ||: ||| || || || | |||| target 3':ACCCAAGAACUAGCGUGAGAAGACGAAGACAG--GGAUGA--AGA--C-GAAG 5' |
-29.00 | 1 | RIC-seq |